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Ïã¸ÛÁùºÏ²ÊÖÐÌØÍø Department of Biochemical Engineering

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Research Projects

A list of current and past research projects, all of which are collaborations with industrial partners

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2020/2021
Project titleResearcherSupervisor(s)/Industrial Partner

3D measurement of fouling in membrane filtration: towards model based investigation and design

Piotr Kucia

Prof Daniel Bracewell & Dr Thomas Johnson

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PALL

Design and characterisation of a scale down perfusion platform for mammalian cell process development

Ciara Lucas

Prof Martina Miceletti & Dr Andrea Rayat

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PALL

Nanofibre adsorbent design informed by mechanistic modelling of bioprocess performance

Gyorgy Ovari

Prof Daniel Bracewell & Dr Stephen Goldrick

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Cytiva

Scalable production of bioengineered fur products

Matt Wasmuth

Dr Darren Nesbeth & Dr Kenth Gustafsson

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Furoid

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2019/2012
Project titleResearcherSupervisor(s)/Industrial Partner
Big data analytics streamlining therapeutic drug development from micro-scale through to industrial-scaleHaneen AlosertProfessor Suzanne Farid and Dr Stephen Goldrick
Understanding the impact of shear stresses on different cell lines in the Allegro STR systemJordan DelbridgeProfessor Martina Micheletti and Dr Andrea Ducci
Evaluating the impacts of pumping stress on aggregate formation during Tangential Flow FiltrationThomas FanthomProfessor Daniel Bracewell and Professor Paul Dalby
Decisional tool to aid portfolio selection decisions into new modalities.Annabel LyleProfessor Suzanne Farid and Dr Stephen Goldrick
Development of a scalable and consistent process for the production of lentivirus for gene-modified cell therapiesCarme Ripoll FiolDr Qasim Rafiq and Dr Andrea Rayat
Development and optimisation of novel bioprinting process for scalable production of tissue models using FRESH techniquePatricia Santos BeatoDr Deepak Kalaskar and Dr Ryo Torri

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2018/2019
Project titleResearcherSupervisor(s)/Industrial Partner
Development of a microfluidic bioanalytical device for the characterization of cellular therapeutic productsJorge Aranda-HernandezProfessor Nicolas Szita and Dr Alex Kiparissides
Optimal Bioreactor: concept / design and implementation for CAR-T cell production
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Alexander DavidsonDr Qasim Rafiq and ProfessorÌýDan Bracewell
Ultra scale-down studies to investigate the impact of pre-column filtration on resin re-use and column foulingIfham Mirza
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Dr Andrea Rayat and Dr Martina Micheletti
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Sterilisable, biocompatible, immersible, spectroscopic planar imaging system
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RobÌýPlattenDr Qasim Rafiq and Professor Dan BracewellÌý
Continuous manufacture of lentivirus vectors for therapeutic vaccine applicationsDale StibbsDr Andrea Rayat and Dr Qasim Rafiq
Optical deconvolution of multiple co-eluting proteins in chromatographyDenizÌýUcanÌýProfessor Paul Dalby and Dr Alex Kiparissides

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2017/2018
Project titleResearcherSupervisor(s)/Industrial Partner
A high throughput, multidimensional approach to engineering biology using automated workflows
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ÌýShama Chilakwad

Profs Gary Lye and John Ward

Synthace

Process development for recovery and purification of exosomes for regenerative therapy
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Benjamin Barnes

Prof Dan Bracewell

ReNeuron

Development of an automated turbidostat platform for the investigation and characterization
of the effects of environmental and process parameters on the physiology and metabolism of green algae
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Matthew Booth

Drs Alex Kiparissides and Martina Micheletti

Algenuity

Continuous Bioprocess Facilities of the Future: Integrated Drug Development & Manufacturing Economics EvaluationHanna Mahal

Prof Suzy Farid and Dr Ajoy Velayudhan

CPI

Process interactions between filtration and chromatographic steps in mAb processingMaria Parau

Profs Dan Bracewell and Mike Hoare

Fujifilm

An ultra scale-down study of normal flow depth filtration for bioprocess recoveryFathima Shazeena Rauf

Profs Mike Hoare and Dan Bracewell

PALL

2016/2017
Project titleResearcherSupervisors/Industrial Partner
Bioprocessing of human T-cells to advance cellular immunotherapiesÌýElena Costratio

Drs Ivan Wall and Martina Micheletti

Sonics

3D polymer scaffolds for the activation of CAR-T cell growthRebecca Gunn

Dr Farlan Veraitch and Prof. Dan Bracewell

Spheritech

Design, synthesis and evaluation of agarose chromatography resins to meet the evolving needs of biologics manufactureGreta Jasulaityte

Prof. Dan Bracewell and Dr Alex Kiparissides

Purolite

An upstream process for removing contaminating cell types from primary T-cell preparationsElsa Noaks

Dr Ivan Wall and Prof. Dan Bracewell

Autolus

Rapid cell culture process development and optimisation using a new micro bioreactor system and advanced modelling approachesÌýVincent Wiegmann

Drs Frank Baganz and Alex Kiparissides

Applikon

2015/2016
Project titleResearcherSupervisor(s)Ìý
Development of DNA nanopores for unitisation in different biochemical applicationsPatrick ArnottDr Stefan Howorka and Prof. Gary Lye
Decisional tool for production planning across clinical development of biopharmaceutical portfoliosMax BaronProfs Suzy Farid and Nigel Titchener-Hooker
Supply chain economics of clinical and commercial autologous ex vivo cell-gene therapy manufactureRuxandra ComiselProf Suzy Farid and Dr Tarit Mukhopadhyay
A Microfluidic approach to test for CQAs of lentiviral vectors for gene therapy vaccinationsJoe HarveyProf Nicolas Szita and Dr Tarit Mukhopadhyay
A combined multi-scale modelling and experimental investigation of the effects of Lactate metabolism on mammalian cell bioprocessingMax LularevicDrs Alex Kiparissides and Cloe Kontoravdi (Imperial)
Efforts to establish Cocal-G enveloped lentiviral producers and Car19 transgene for the purpose of future bioprocessing and comparison to VSV-G EnvelopesChris PerryDrs Tarit Mukhopadhyay and Yasu Takeuchi
Integrating upstream and recovery scale-down mimics with predictive modelling for the evaluation of the process's window of operationMartina SebastianProfs Suzy Farid and Nigel Titchener-Hooker
Designer virus like particle (VLP) assembly in microbial expression systemSarah SlackDr Tarit Mukhopadhyay and Prof. Dan Bracewell
Ultra scale-down mimics for perfusion culture: experimental and modelling optimisation study for rapid biopharmaceutical process developmentMolly TregidgoDr Martina Micheletti and Prof. Suzy Farid
Simulating the effect of large scale bioreactor heterogeneities on cell culture performance: a combined experimental and modelling approachÌýRoman ZakrzewskiProf Gary Lye and Dr Alex Kiparissides
2014/2015
Project titleResearcherSupervisor(s)Ìý
ÌýThe use of continuous flow bioconversion reactors in novel biorefinery applicationsÌýRoberto ChiocchioProfs. Gary Lye and
Process development for recovery and purification of exosomes for regenerative therapyIvano ColaoDr Ivan Wall and Prof Dan Bracewell
Ultra scale-down (USD) methods for enhanced insight of membrane processing of engineered proteinsLara Fernandez CerezoProfs Mike Hoare and Gary Lye
Development of an automated high-throughput purification methodology for macromolecular medicinesVivien FischerProfs Aly Velayudhan and Eric Fraga
X-ray tomography for the characterisation of bioseparation materialsÌýThomas JohnsonProf Dan Bracewell and Dr Paul shearing
A scale-down engineering study of key steps in the manufacture of a medicinal toxinÌý Darryl KongProfs Nigel Titchener-Hooker and Dan Bracewell
Nanoscale high-throughput whole-process analytics to monitor key quality attributesÌý Zaenab OshinboluProfs Dan Bracewell and Paul Dalby
2013/2014
Project titleResearcherSupervisor(s)Ìý
Gene Delivery Vector Platforms for Novel Gene TherapiesAli SadferDr Darren Nesbeth,ÌýProf Chris Mason
Real-Time Visualisation of Protein Self-AssemblyHasan AlkaseemDr Bart Hoogenboom,ÌýDr Daniel Bracewell
Novel Chassis for Engineered PathwaysAisha AsraProf John Ward
ÌýÌýRuchika BandekarÌýProf Gary Lye
Financial and Operational Perspectives of Cell Therapy BioprocessingÌýTania ChilmaÌýDr Suzanne Farid, Dr Sofia Simaria
Optimisation of Antibody Expression and Recovery from High Cell Density Microbial Fermentations at the Microwell ScaleÌýMary LunsonÌýProf Gary Lye
Understand cell lysis in fermentation and primary recovery by online viscosity sensorÌýJoseph NewtonÌýDr Yuhong Zhou
Bioabsorbable tracheal scaffolds for clinical applicationÌýToby ProctorProf Chris Mason, Dr Farlan VeraitchÌý
S-Layer Lattice Assembly for Biotechnological ApplicationsÌýBouran SohrabiDr Stefan Howorka,ÌýProf Gary LyeÌý
Leveraging High-Throughput Purification Data using Advanced Visualisation and Predictive ToolsÌýChristos StamatisDr. Suzanne Farid, Prof Nigel Titchener-Hooker
Nanofibre Adsorbents as a Purification Platform for Emerging Viral Vectores and VaccinesÌýJordan TurnbullÌýDr Daniel Bracewell
2012/2013
TitleResearcherSupervisor(s)Ìý
An Integrated Scale-Down Platform for the Extraction and Recovery of Periplasmically Expressed Complex Molecules from E.ColiAsma AhmadDr Martina Micheletti, Prof Eli Keshavarz-MooreÌý
Scalable Production of Tissue Engineered Microunits for Bone Regeneration Using Bioactive Glass Microshperes and Dynamic Culture ConditionsDavid De Silva ThompsonDr Ivan Wall, Dr Martina MichelettiÌý
Primary recovery of high-value products from high cell density harvestsAnne Marie De VilliersDr Tarit Mukhopadhyay, Prof Nigel Titchener-HookerÌý
Rapid Fermentation Process Optimisation using State-of-the-Art Mini Bioreactors and Advanced Modelling ApproachesAaron ErbasDr Frank Baganz, Prof Gary LyeÌý
Induced Pluripotent Stem Cell Processing for Drug Discovery Platforms and Cell therapy Products: Process EconomicsMichael JenkinsDr Suzanne Farid, Dr Sofia SimariaÌý
Evaluation of Biological and Process Options for Alkaline BiooxidationsJohannes KolmarDr Frank BaganzÌý
Development of Synthetic Shear Tracer Particles for Scale-Down Models of Continuous Centrifugation and Density Gradient Ultra-Centrifugation and a Mimic of Various Vaccine CandidatesBeatrice MelinekDr Tarit Mukhopadhyay, Dr Daniel Bracewell
Understanding Protease Contaminants during Biopharmaceutical Manufacture from CHO Cell CultureDamiano MiganiDr Daniel Bracewell, Prof Mark SmalesÌý
A Comparison between Aqueous Two-Phase Extraction and Chromatography for the Separation of Novel Biopharmaceuticals using High Throughput Process Development (HTPD)ÌýMethodologiesNehal PatelDr Daniel Bracewell, Dr Eva Sorensen
Rapid Materialisation of Synthetic Biology ProductsJames RutleyProf Gary Lye, Dr Martina MichelettiÌý
Purification of Recombinnat Vaccinia Viruses for Cancer Therapy and Cancer Vaccine using Monolthic Column TechnologyDavid VincentDr Yuhong Zhou, Dr Daniel BracewellÌý
2011/2012
TitleResearcherSupervisor(s)
Novel Strategies for Early Downstream Processing of High-Density Mammalian Cell CultureGeorgina Espuny Garcia Del RealDr Daniel Bracewell, Prof Michael HoareÌý
Scale-Down Characterisation and Modelling of Harvest Operations in Cell Culture ProcessesÌýJoseph AllenProf Nigel Titchener-Hooker, Dr Suzanne Farid
Developing a Novel and Cost-Effective Method of Purification or Therapeutic Proteins using Affinity TagsAdam McInallyProf Michael Hoare, Dr Paul Dalby
Engineering Characterisation of Cylindrical Shaken Bioreactors for Improved Cell Culture Process Development and Scale-UpGregorio RodriguezDr Martina Micheletti, Dr Andrew Ducci (Ïã¸ÛÁùºÏ²ÊÖÐÌØÍø Chemical Engineering)
Cell and Protein Engineering Strategies to Maximise the Recovery and Dimerisation of a Biotherapeutic Antibody-Enzyme Fusion Protein Produced in E.ColiDesmond SchofieldDr Darren Nesbeth, Dr Kerry Chester (Ïã¸ÛÁùºÏ²ÊÖÐÌØÍø Oncology)Ìý
Applications of an Ultra-Rapid Next-Gen ÌýThermocycler in PCR-based Bioprocess MonitoringAlex TemplarDr Darren Nesbeth, Prof Eli Keshavarz-MooreÌý
An Upstream Platform for the Production of High Grade Heterologous Proteins in Pichia PastorisBen WeilDr Darren Nesbeth, Dr Daniel BracewellÌý
2010/2011
TitleResearcherÌýSupervisor(s)Ìý
Scale Down and Optimisation of a Novel Second Generation Bioethanol ProcessNeil ConroyProf Gary Lye, Dr Paul DalbyÌý
Microscale Methods for the Rapid Analysis of Antibiotic Compound Libraries and Systematic Downstream Process DesignHaroon KhanProf Gary Lye, Dr Nicholas SzitaÌý
An Ultra Scale-Down Tool for the Predicitve Design of a Filtration Procedure for Preparation of Human Cell TherapiesChris LongsterProf Michael Hoare, Dr Ivan WallÌý
Engineering Characterisation of Single-Use Wave-Type Bioreactors for Improved Cell Culture Process Development and Scale-UpDouglas MarshProf Gary Lye, Dr Martina MichelettiÌý
Design and Evaluation of an Internally Radiating Photobioreactor for Generic Application in the Algal Production of Biofuels, Biorenewable Chemicals and BiopharmaceuticalsKane MillerProf Gary Lye, Dr Martina MichelettiÌý
High Throughput Protein Precipitation for Monoclonal Antibody PurificationChris MorrisProf Nigel Titchener-Hooker, Dr Paul DalbyÌý
Streamlined Purification and Process Understanding of Polysaccharide Vaccine ComponentsAaron NoyesDr Tarit Mukhopadhyay, Prof Nigel Titchener-HookerÌý
Towards a More Efficient Platform for Inclusion Body Processing from Engineered E.ColiAminat OmotoshoProf Eli Keshavarz-Moore, Dr Gareth MannallÌý
Novel Primary Recovery Srategies for High Cell Density Mammalian CellDaria PopovaProf Nigel Titchener-Hooker, Dr Suzanne FaridÌý
Non-Geometric Scale Up of Chromatographic Separations of BiopharmaceuticalsJayan SenaratneProf Nigel Titchener-Hooker, Dr Daniel BracewellÌý
Controlling Early Cell Human Embryonic Stem Cell Fate with Growth Factors and Oxygen ConcentrationVishal SharmaDr Farlan Veraitch, Dr Nicholas SzitaÌý
Production Planning across Multi-Site, Multi-Product Biopharmaceutical Plants under UncertaintyCyrus SiganporiaDr Suzanne Farid, Dr Lazaros PapageorgiouÌý
2009/2010
TitleResearcherÌýSupervisor(s)Ìý
Improving Bone Marrow Stem Cell Therapy for Cardiac RepairOwen BainDr Ivan Wall, Prof Chris Mason
Incorporation of Developability into Cell Line Selection: Creation of a Simplified High-Throughput Small-Scale Model for a mAb Manufacturing ProcessJohn BettsProf Gary Lye, Dr Frank BaganzÌý
Small Scale, High Throughput Process Development with a Focus on Novel Therapeutic ProteinsAlex ChatelProf Mike Hoare, Prof Nigel Titchener-HookerÌý
Process Modelling Approaches to Biological Complexity in the Production of Therapeutic ProteinsEdward CloseDr Daniel Bracewell, Dr Eva SorensenÌý
Microscale Characterisaton of a Manufacturing Route for Lentiviral VectorsHeather GuyDr Tarit Mukhopadhyay, Prof Gary LyeÌý
Measurement of Protein Self-Association Behaviour as a Determinant of Aggregation in BioprocessingKrisztina Kovacs-SchreinerDr Daniel Bracewell, Prof Michael HoareÌý
A Microscale Purification Platform for the Study of Fusion Protein RecoveryEduardo LauProf Michael Hoare, Dr Paul DalbyÌý
Dental Stem Cells for Tooth Regeneration and RepairYvonne PangÌýDr Ivan Wall, Prof Chris MasonÌý
Scale-Up of Tissue Engineering Trachea using Adult Stem CellsLeanne PartingtonDr Ivan Wall, Prof Chris Mason
The Bioprocessing of Human Embryonic Stem Cells to Treat BlindnessIwan Thomas RobertsProf Chris Mason, Prof Peter Coffey
Investigation of IgG Aggregate Formation in Biopharmaceutical Processes; A Study of the Location and Mechanism of AggregationRoumteen Tavakoli-KesheDr Daniel Bracewell, Prof Nigel Titchener-Hooker
Scaling Omnicyte (Adult Stem Cells) Therapy for Safe, Effective and Affordable Clinical Use. Characterisation of miRNAs for Stem Cell Expansion and Regenerative MedicineJohn ThwaitesDr Ivan Wall, Prof Chris MasonÌý
Pre-Formulation Screening: High Throughput Tools to Formulate dABs and Predict Stability ProfilesUdofoyo UyeDr Paul Dalby, Prof Michael HoareÌý